BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E10SP1|AL427337
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1744 1701 0.0
>3x_Contig1744
Length = 24119
Score = 1701 bits (857), Expect = 0.0
Identities = 873/877 (99%), Gaps = 2/877 (0%)
Strand = Plus / Plus
Query: 1 gatctcacttcctaataagaatggttactacctgattagggaaattgctaagggagattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gatctcacttcctaataagaatggttactacctgattagggaaattgctaagggagattc 426
Query: 61 acacttctgcgtaaattcttacgcaccgcagtgtggtgtactgatatacccgacttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acacttctgcgtaaattcttacgcaccgcagtgtggtgtactgatatacccgacttttta 486
Query: 121 taaaaacacagtcctcagagttgccagaccaaaagatacgcgcgacacccttacaccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 taaaaacacagtcctcagagttgccagaccaaaagatacgcgcgacacccttacaccatt 546
Query: 181 cagcgtaccactcagcacgcaccacgcacattgaaaaaaaattcttttctagccaaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 cagcgtaccactcagcacgcaccacgcacattgaaaaaaaattcttttctagccaaagct 606
Query: 241 catcacttgaatattgagaaagtattaagaacttgatataacttgcaagagtttactgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 catcacttgaatattgagaaagtattaagaacttgatataacttgcaagagtttactgca 666
Query: 301 ttagtattaagctatcagttcttgttgattgadattgttatctattctcttcttttgatt 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 667 ttagtattaagctatcagttcttgttgattgaaattgttatctattctcttcttttgatt 726
Query: 361 catcagaacaacacatctcaaggaattaactgaaaagaaatgtcttccagcaatattatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 catcagaacaacacatctcaaggaattaactgaaaagaaatgtcttccagcaatattatg 786
Query: 421 cttgttttgagaggtaccctagaaggtcacaacggctgggtcacctctttgtctacctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 cttgttttgagaggtaccctagaaggtcacaacggctgggtcacctctttgtctacctct 846
Query: 481 gctgctcaaccaaacttgttggtttctggttccagagataagactttgatctcctggaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gctgctcaaccaaacttgttggtttctggttccagagataagactttgatctcctggaga 906
Query: 541 ttgaccgaaaacgaacaacaattcggtgtcccagttagatcttacaagggtcactctcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 ttgaccgaaaacgaacaacaattcggtgtcccagttagatcttacaagggtcactctcac 966
Query: 601 atcgttcaagatgttgttgtctctgctgacggtaactacgccgtttctgcttcttgggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 atcgttcaagatgttgttgtctctgctgacggtaactacgccgtttctgcttcttgggat 1026
Query: 661 aagaccttgagattgtggaacttggctactggtaactctgaagctagatttgttggtcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 aagaccttgagattgtggaacttggctactggtaactctgaagctagatttgttggtcac 1086
Query: 721 accggtgatgttttgtccgttgccattgatgctaactcttctaagattatctctgcttcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 accggtgatgttttgtccgttgccattgatgctaactcttctaagattatctctgcttcc 1146
Query: 781 agagataagaccatcagagtttggaacactgtcggtgactgtgcctacgtcttgttgggt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 agagataagaccatcagagtttggaacactgtcggtgactgtgcctacgtcttgttgggt 1206
Query: 841 -mcaccgactgggtta-caaggtcagagttgctccaa 875
|||||||||||||| ||||||||||||||||||||
Sbjct: 1207 cacaccgactgggttaccaaggtcagagttgctccaa 1243
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6268
Number of Sequences: 1807
Number of extensions: 6268
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)